Basic Information
Locus ID:
COCNU_12G002580
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
BCE2
Description:
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 24636022 | 24667466 | + | COCNU_12G002580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.41 | 29,728.84 Da | 52.92 | 90.84 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 108 | 263 | 4.4E-80 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 106 | 215 | 4.06E-22 | IPR036227 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 4 | 108 | 7.33E-21 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 107 | 1.5E-48 | - |
| Gene3D | G3DSA:3.100.10.10 | - | 108 | 263 | 1.4E-81 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 263 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko00280 (Valine, leucine and isoleucine degradation)
map00280 (Valine, leucine and isoleucine degradation)
ko00640 (Propanoate metabolism)
map00640 (Propanoate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02662 (2-Methylpropanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine)
R03174 ((S)-2-Methylbutanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylbutanoyl)dihydrolipoyllysine)
R04097 (3-Methylbutanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(3-methylbutanoyl)dihydrolipoyllysine)
R10998 (Propanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + Enzyme N6-(S-propyldihydrolipoyl)lysine)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_020268682.1 | 60S ribosomal protein L18-2-like [Asparagus officinalis] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0IR85 | Putative 60S ribosomal protein L18-2 OS=Cocos nucifera OX=13894 GN=COCNU_12G002580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology