Basic Information
Locus ID:
COCNU_12G001000
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 17371990 | 17377519 | + | COCNU_12G001000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 82,203.30 Da | 35.59 | 85.05 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 414 | 668 | 6.66335E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 411 | 667 | 2.0E-42 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 137 | 323 | 4.9E-44 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 8 | 97 | 8.93E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 700 | 5.66E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 483 | 4.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 6 | 124 | 1.1E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 683 | 1.2E-49 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 135 | 328 | 9.0E-37 | - |
| SMART | SM00220 | serkin_6 | 408 | 668 | 4.1E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 674 | 31.693388 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 26 | 48 | 7.165205 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 528 | 540 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 743 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_010941603.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IQF7 | Putative LRR receptor-like serine/threonine-protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_12G001000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology