Basic Information
Locus ID:
COCNU_11G013060
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 60211718 | 60215938 | - | COCNU_11G013060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 47,925.08 Da | 42.87 | 98.17 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 99 | 365 | 3.54094E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 364 | 1.0E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 364 | 4.99E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 379 | 4.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 169 | 9.2E-36 | - |
| SMART | SM00220 | serkin_6 | 93 | 364 | 1.2E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 372 | 38.816925 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 99 | 121 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.3 | - | 0 |
| RefSeq | XP_010929305.1 | putative serine/threonine-protein kinase isoform X1 [Elaeis guineensis] | 0 |
| C0LGH2 | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IQG9 | Cold-responsive protein kinase 1 OS=Cocos nucifera OX=13894 GN=COCNU_11G013060 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg15719 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30283650 |
| Apiaceae | Apium graveolens | 1 | Ag2G02684 |
| Arecaceae | Cocos nucifera | 1 | COCNU_11G013060 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103714124 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.655.V1.1, AsparagusV1_05.2428.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri14G26365, Ftri15G11494, Ftri4G14010 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2044 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2236 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2435 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.547 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000456 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2578, BH09.2802, CH09.3002 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0300910, gene-QOZ80_4BG0331630 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0202390.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_047053 |
| Poaceae | Oryza coarctata | 2 | Oco07G018040, Oco08G017390 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g56360.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G266900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0300542, Pt_Chr0300563 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr25G001550, Chr30G001550 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G846300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG070440, gene_TRIDC2BG076120 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G500700.1, TraesCS2B02G528600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb067640_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-6082 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g22136 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.316 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-13247, nbisL1-mrna-25496 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-3708, nbisL1-mrna-7378 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16729 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000008l.1168, evm.TU.utg000033l.211 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014829 |
| Salicaceae | Populus euphratica | 1 | populus_peu05786 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132602012 |
| Solanaceae | Solanum chilense | 1 | SOLCI001403600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107024503 |