Basic Information
Locus ID:
COCNU_11G011600
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 56843139 | 56848503 | - | COCNU_11G011600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 69,259.57 Da | 42.68 | 92.66 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 305 | 571 | 1.2E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 71 | 2.8E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 182 | 1.5E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 196 | 3.74E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 574 | 7.72E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 593 | 8.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 380 | 4.7E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 213 | 3.6E-59 | IPR032675 |
| SMART | SM00220 | serkin_6 | 304 | 573 | 2.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 559 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 332 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_010929457.1 | protein NSP-INTERACTING KINASE 1 [Elaeis guineensis] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IQM1 | Protein NSP-INTERACTING KINASE 1 OS=Cocos nucifera OX=13894 GN=COCNU_11G011600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology