Basic Information
Locus ID:
COCNU_11G010130
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 53932685 | 53937530 | - | COCNU_11G010130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 83,236.92 Da | 48.27 | 80.21 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 11 | 145 | 2.05729E-57 | - |
| Pfam | PF00582 | Universal stress protein family | 12 | 121 | 5.4E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 426 | 679 | 3.5E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 683 | 1.62E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 12 | 128 | 2.26E-9 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 142 | 1.4E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 709 | 7.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 403 | 496 | 2.7E-25 | - |
| SMART | SM00220 | serkin_6 | 424 | 684 | 5.2E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 424 | 687 | 35.509567 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| Coils | Coil | Coil | 290 | 310 | - | - |
| Coils | Coil | Coil | 375 | 402 | - | - |
| Coils | Coil | Coil | 350 | 370 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_019707763.1 | U-box domain-containing protein 35 [Elaeis guineensis] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IPV4 | U-box domain-containing protein 35 OS=Cocos nucifera OX=13894 GN=COCNU_11G010130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology