Basic Information
Locus ID:
COCNU_11G009960
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 53532485 | 53545123 | - | COCNU_11G009960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 39,013.79 Da | 40.74 | 99.66 | 0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 98 | 143 | 6.1E-9 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 93 | 346 | 1.02E-21 | IPR036259 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 6 | 94 | 3.4E-11 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 21 | 93 | 9.3E-13 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 94 | 350 | 2.2E-31 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010928751.1 | organic cation/carnitine transporter 7 isoform X2 [Elaeis guineensis] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IRD0 | Organic cation/carnitine transporter 7 OS=Cocos nucifera OX=13894 GN=COCNU_11G009960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology