Basic Information
Locus ID:
COCNU_11G008010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Monogalactosyldiacylglycerol (MGDG) synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 48744835 | 48747841 | - | COCNU_11G008010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 46,546.93 Da | 42.62 | 84.18 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 170 | 205 | 1.7E-7 | IPR009695 |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 256 | 330 | 2.0E-8 | IPR007235 |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 91 | 169 | 7.2E-16 | IPR009695 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 83 | 403 | 9.1E-23 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 214 | 386 | 3.7E-25 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_010928301.1 | probable monogalactosyldiacylglycerol synthase 3, chloroplastic [Elaeis guineensis] | 0 |
| Q0DWQ1 | Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MGD3 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8K0IR09 | monogalactosyldiacylglycerol synthase OS=Cocos nucifera OX=13894 GN=COCNU_11G008010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology