Basic Information
Locus ID:
COCNU_11G005660
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 39425917 | 39432969 | - | COCNU_11G005660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 90,508.82 Da | 43.00 | 83.50 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 95 | 291 | 1.62442E-100 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 109 | 268 | 8.8E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 273 | 762 | 1.1E-191 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 86 | 301 | 2.36E-63 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 624 | 745 | 6.93E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 344 | 602 | 2.12E-88 | IPR020568 |
| Gene3D | G3DSA:3.40.50.11260 | - | 515 | 601 | 3.2E-33 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 602 | 749 | 8.7E-52 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 342 | 514 | 4.3E-72 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 72 | 315 | 4.6E-90 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 108 | 270 | 8.8E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 61 | 785 | 7.2E-238 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 106 | 115 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 174 | 191 | 1.5E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 129 | 1.5E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 203 | 225 | 1.5E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 156 | 173 | 1.5E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 277 | 295 | 1.5E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 258 | 275 | 1.5E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 86 | 106 | 1.5E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 79 | 746 | 25.989622 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 785 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 326 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_010927989.1 | heat shock protein 90-5, chloroplastic [Elaeis guineensis] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N985 | Heat shock protein 90-5, chloroplastic OS=Cocos nucifera OX=13894 GN=COCNU_11G005660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology