Basic Information
Locus ID:
COCNU_11G002360
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Type I inositol-1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 7506453 | 7521554 | + | COCNU_11G002360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 122,451.34 Da | 47.30 | 74.54 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 627 | 888 | 6.2E-11 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 247 | 599 | 1.17E-22 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 600 | 919 | 4.03E-45 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 457 | 630 | 7.4E-12 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 663 | 929 | 1.0E-66 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 191 | 357 | 2.7E-8 | IPR015943 |
| SMART | SM00128 | i5p_5 | 560 | 903 | 1.8E-66 | IPR000300 |
| SMART | SM00320 | WD40_4 | 557 | 594 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 518 | 555 | 4.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 478 | 516 | 32.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 236 | 277 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 298 | 337 | 1.6 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_010927608.1 | type I inositol polyphosphate 5-phosphatase 13 [Elaeis guineensis] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0N8W9 | Type I inositol polyphosphate 5-phosphatase 12 OS=Cocos nucifera OX=13894 GN=COCNU_11G002360 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology