Basic Information
Locus ID:
COCNU_11G000580
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
monogalactosyldiacylglycerol synthase 3, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 2024979 | 2029310 | + | COCNU_11G000580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 53,363.93 Da | 46.40 | 87.64 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 78 | 450 | 4.41945E-142 | - |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 89 | 257 | 1.2E-58 | IPR009695 |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 284 | 406 | 7.7E-9 | IPR007235 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 78 | 454 | 7.46E-25 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 265 | 438 | 1.5E-27 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 54 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_010927356.1 | probable monogalactosyldiacylglycerol synthase 3, chloroplastic [Elaeis guineensis] | 0 |
| Q0DWQ1 | Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MGD3 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8K0N8B6 | monogalactosyldiacylglycerol synthase OS=Cocos nucifera OX=13894 GN=COCNU_11G000580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology