Basic Information
Locus ID:
COCNU_10G009170
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 44326872 | 44345059 | + | COCNU_10G009170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 90,247.17 Da | 47.74 | 85.10 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 622 | 776 | 2.22363E-57 | - |
| Pfam | PF06337 | DUSP domain | 14 | 100 | 4.8E-20 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 268 | 775 | 1.4E-51 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 221 | 778 | 4.91E-92 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 13 | 100 | 5.75E-19 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 268 | 372 | 1.6E-27 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 203 | 267 | 9.5E-16 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 11 | 114 | 3.0E-28 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 544 | 785 | 1.1E-55 | - |
| SMART | SM00695 | dusp | 4 | 103 | 3.7E-17 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 1 | 100 | 14.311861 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 223 | 778 | 43.565174 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 224 | 239 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 720 | 737 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 539 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 539 | 554 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_038977530.1 | ubiquitin carboxyl-terminal hydrolase 9-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IMQ9 | Ubiquitin carboxyl-terminal hydrolase OS=Cocos nucifera OX=13894 GN=COCNU_10G009170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology