Basic Information
Locus ID:
COCNU_10G005790
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14631046 | 14632362 | + | COCNU_10G005790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 47,214.01 Da | 49.55 | 84.20 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 254 | 320 | 1.07399E-39 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 33 | 191 | 6.9E-35 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 260 | 305 | 5.7E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 253 | 320 | 2.62E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 250 | 322 | 1.9E-17 | IPR036638 |
| SMART | SM00353 | finulus | 262 | 311 | 3.1E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 256 | 305 | 17.415363 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 267 | - | - |
| Coils | Coil | Coil | 295 | 322 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_019709239.1 | LOW QUALITY PROTEIN: transcription factor MYC2-like [Elaeis guineensis] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0ILZ0 | Transcription factor MYC3 OS=Cocos nucifera OX=13894 GN=COCNU_10G005790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology