Basic Information
Locus ID:
COCNU_10G005770
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Ubiquitin fusion degradation protein UFD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14598089 | 14602791 | + | COCNU_10G005770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 14,631.59 Da | 53.94 | 90.30 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 54 | 108 | 5.9E-16 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 52 | 106 | 5.0E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 135 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.3 | - | 0 |
| RefSeq | XP_010933942.1 | ubiquitin fusion degradation protein 1 homolog isoform X2 [Elaeis guineensis] | 0 |
| TrEMBL | A0A8K0ING8 | ORF2 OS=Cocos nucifera OX=13894 GN=COCNU_10G005770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology