Basic Information
Locus ID:
COCNU_10G004470
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
CDPK-related protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 10363889 | 10382782 | - | COCNU_10G004470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 31,592.19 Da | 54.57 | 64.10 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 145 | 253 | 1.05E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 128 | 244 | 2.2E-7 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 293 | 8.725638 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 159 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46700.1 | CDPK-related kinase 3. | 0 |
| RefSeq | XP_010933745.1 | CDPK-related kinase 3 isoform X3 [Elaeis guineensis] | 0 |
| Q9ZUZ2 | CDPK-related kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N852 | Putative CDPK-related protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_10G004470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032068 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30165530 |
| Arecaceae | Cocos nucifera | 4 | COCNU_01G016240, COCNU_10G004470, COCNU_16G000340 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.1961.V1.1, AsparagusV1_08.550.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G26530 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g03480 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0084940.1, HORVU.MOREX.r3.3HG0283610.1 |
| Poaceae | Zea mays | 3 | Zm00001eb093950_P001, Zm00001eb145760_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-34372, nbis-gene-45412 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG02.1200 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-799 |
| Zosteraceae | Zostera marina | 2 | Zosma02g23970.v3.1, Zosma05g30300.v3.1 |