Basic Information
Locus ID:
COCNU_10G004270
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 10004904 | 10005934 | + | COCNU_10G004270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 22,619.15 Da | 55.88 | 72.28 | -0.50 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A8K0IN76 | Autophagy-related protein OS=Cocos nucifera OX=13894 GN=COCNU_10G004270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7937 |
| Amaranthaceae | Suaeda glauca | 21 | Sgl01711, Sgl02695, Sgl06865, Sgl07852, Sgl10642, Sgl12296 ... |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G004270 |
| Asteraceae | Flaveria trinervia | 2 | Ftri17G04102, Ftri5G14832 |
| Brassicaceae | Brassica nigra | 6 | BniB02g026020.2N, BniB03g050210.2N, BniB05g050630.2N ... |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G03974 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_013442, gene-QYE76_055164, gene-QYE76_056584 ... |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_10413 |
| Zosteraceae | Zostera marina | 1 | Zosma06g16920.v3.1 |