Basic Information
Locus ID:
COCNU_09G009070
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 55857385 | 55861478 | + | COCNU_09G009070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 111,582.99 Da | 40.29 | 100.61 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 71 | 1.5E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 158 | 2.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 712 | 987 | 6.3E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 482 | 542 | 1.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 307 | 1.77E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 234 | 603 | 1.29E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 709 | 990 | 3.83E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 629 | 1.1E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 190 | 3.4E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 797 | 3.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 268 | 333 | 2.5E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1013 | 3.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 267 | 3.7E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 362 | 385 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 270.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 990 | 9.2E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 1016 | 37.544865 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 840 | 852 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 740 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1025 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_010936120.1 | MDIS1-interacting receptor like kinase 1 [Elaeis guineensis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N7R1 | MDIS1-interacting receptor like kinase 1 OS=Cocos nucifera OX=13894 GN=COCNU_09G009070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology