Basic Information
Locus ID:
COCNU_09G008920
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 55411206 | 55418376 | - | COCNU_09G008920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 125,514.37 Da | 52.29 | 67.62 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 177 | 273 | 6.53852E-45 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1047 | 1139 | 1.9E-15 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 190 | 272 | 5.2E-21 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1033 | 1140 | 3.65E-21 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 190 | 282 | 2.8E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1035 | 1130 | 3.7E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 192 | 275 | 8.8E-13 | - |
| SMART | SM00666 | PB1_new | 188 | 275 | 1.6E-31 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 173 | 273 | 11.103189 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1042 | 1141 | 15.778504 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1048 | 1069 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 982 | 1016 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1006 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_008789506.2 | uncharacterized protein LOC103706982 isoform X1 [Phoenix dactylifera] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N7Q8 | Putative Serine/threonine-protein kinase CTR1 OS=Cocos nucifera OX=13894 GN=COCNU_09G008920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology