Basic Information
Locus ID:
COCNU_09G008280
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 53875123 | 53887783 | - | COCNU_09G008280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 118,146.93 Da | 41.38 | 86.39 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 646 | 686 | 8.39876E-18 | - |
| Pfam | PF16135 | Tify domain binding domain | 580 | 629 | 1.8E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 647 | 688 | 1.7E-7 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 423 | 478 | 4.6E-16 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 888 | 1050 | 1.35E-7 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 625 | 689 | 2.04E-16 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 735 | 788 | 1.54E-8 | IPR011011 |
| Gene3D | G3DSA:3.40.630.30 | - | 831 | 1001 | 1.9E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 735 | 793 | 4.0E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 634 | 722 | 2.2E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 739 | 791 | 0.0012 | IPR001965 |
| SMART | SM00249 | PHD_3 | 646 | 687 | 2.7E-9 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 644 | 689 | 10.2999 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 647 | 686 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 358 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_019709793.1 | uncharacterized protein LOC105055615 [Elaeis guineensis] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N7I2 | Putative increased DNA methylation 1 OS=Cocos nucifera OX=13894 GN=COCNU_09G008280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology