Basic Information
Locus ID:
COCNU_09G007960
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 53304996 | 53313912 | + | COCNU_09G007960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 85,174.61 Da | 75.96 | 61.36 | -1.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 625 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 72 | - | - |
| Coils | Coil | Coil | 86 | 106 | - | - |
| Coils | Coil | Coil | 660 | 680 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.2 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010935844.1 | zinc finger CCCH domain-containing protein 13 [Elaeis guineensis] | 0 |
| TrEMBL | A0A8K0IJZ6 | Zinc finger CCCH domain-containing protein 13 OS=Cocos nucifera OX=13894 GN=COCNU_09G007960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology