Basic Information
Locus ID:
COCNU_09G004300
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 44995010 | 44997682 | + | COCNU_09G004300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 96,682.81 Da | 30.06 | 100.93 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 700 | 870 | 1.6E-31 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.2E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 527 | 586 | 1.7E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 455 | 513 | 6.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 869 | 3.91E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 324 | 615 | 4.42E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 395 | 5.49E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 223 | 4.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 526 | 626 | 2.9E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 378 | 4.2E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 138 | 4.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 676 | 774 | 1.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 454 | 525 | 1.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 379 | 453 | 2.3E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 880 | 7.2E-30 | - |
| SMART | SM00369 | LRR_typ_2 | 285 | 308 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 6.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 573 | 598 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 572 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 698 | 887 | 2.5E-10 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 476 | 499 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 698 | 890 | 29.545019 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 549 | 562 | 5.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 288 | 301 | 5.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_008808401.2 | LOW QUALITY PROTEIN: leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 [Phoenix dactylifera] | 0 |
| Q5Z9N5 | Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica OX=39947 GN=FON1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IJH4 | Receptor protein kinase CLAVATA1 OS=Cocos nucifera OX=13894 GN=COCNU_09G004300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology