Basic Information
Locus ID:
COCNU_09G002230
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 36181385 | 36184716 | - | COCNU_09G002230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 109,274.93 Da | 40.09 | 98.50 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 97 | 111 | 1.9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 412 | 470 | 6.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 70 | 1.6E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 705 | 993 | 8.5E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 267 | 326 | 8.4E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 306 | 619 | 6.46E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 706 | 995 | 8.77E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 399 | 2.82E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 1010 | 8.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 312 | 7.3E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 315 | 631 | 1.7E-89 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 683 | 786 | 1.3E-18 | - |
| SMART | SM00369 | LRR_typ_2 | 458 | 481 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 705 | 999 | 1.2E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 576 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 51.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 999 | 38.463573 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 708 | 731 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 844 | 856 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1008 | 1030 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010934709.1 | leucine-rich repeat receptor-like protein kinase TDR [Elaeis guineensis] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IKU5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Cocos nucifera OX=13894 GN=COCNU_09G002230 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology