Basic Information
Locus ID:
COCNU_09G000700
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 13488111 | 13488482 | - | COCNU_09G000700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.86 | 8,502.80 Da | 39.28 | 100.14 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07650 | KH domain | 2 | 50 | 3.3E-8 | IPR004044 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 1 | 56 | 9.16E-16 | IPR009019 |
| Gene3D | G3DSA:3.30.1140.32 | - | 50 | 74 | 1.6E-5 | IPR036419 |
| Gene3D | G3DSA:3.30.300.20 | - | 1 | 48 | 7.1E-24 | IPR015946 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53870.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_021664469.1 | 40S ribosomal protein S3-1 [Hevea brasiliensis] | 0 |
| Q9M339 | Small ribosomal subunit protein uS3y OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IIS1 | Putative 40S ribosomal protein S3-1 OS=Cocos nucifera OX=13894 GN=COCNU_09G000700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology