Basic Information
Locus ID:
COCNU_08G010770
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 54836859 | 54847244 | - | COCNU_08G010770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 110,064.92 Da | 41.21 | 82.01 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 654 | 694 | 1.90139E-17 | - |
| Pfam | PF16135 | Tify domain binding domain | 588 | 637 | 6.8E-18 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 431 | 486 | 9.3E-17 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 655 | 695 | 2.3E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 743 | 802 | 8.2E-8 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 893 | 986 | 3.61E-7 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 641 | 695 | 2.88E-16 | IPR011011 |
| Gene3D | G3DSA:3.40.630.30 | - | 838 | 1000 | 5.4E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 641 | 717 | 6.6E-18 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 741 | 801 | 2.0E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 654 | 695 | 1.2E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 747 | 799 | 0.0013 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 652 | 697 | 10.273199 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 655 | 694 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 95 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_010940549.1 | uncharacterized protein LOC105059081 [Elaeis guineensis] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IK31 | Putative increased DNA methylation 1 OS=Cocos nucifera OX=13894 GN=COCNU_08G010770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology