Basic Information
Locus ID:
COCNU_08G008340
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 49968247 | 49970957 | + | COCNU_08G008340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 72,046.88 Da | 55.88 | 72.96 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 476 | 552 | 7.92619E-46 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 483 | 528 | 8.7E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 64 | 245 | 3.3E-51 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 482 | 549 | 1.44E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 478 | 556 | 9.2E-17 | IPR036638 |
| SMART | SM00353 | finulus | 485 | 534 | 5.2E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 479 | 528 | 17.18038 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 58 | - | - |
| Coils | Coil | Coil | 525 | 559 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_010941241.1 | transcription factor MYC2 [Elaeis guineensis] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IHY2 | Transcription factor MYC2 OS=Cocos nucifera OX=13894 GN=COCNU_08G008340 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology