Basic Information
Locus ID:
COCNU_08G007290
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 47182385 | 47185310 | + | COCNU_08G007290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 77,320.23 Da | 41.80 | 83.47 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 19 | 179 | 2.20315E-87 | - |
| Pfam | PF00183 | Hsp90 protein | 161 | 668 | 4.4E-234 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 32 | 158 | 4.3E-11 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 517 | 639 | 7.45E-39 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 10 | 190 | 3.49E-61 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 239 | 494 | 1.29E-108 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 494 | 644 | 8.5E-67 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 8 | 138 | 6.2E-57 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 238 | 406 | 7.9E-86 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 407 | 493 | 5.9E-42 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 139 | 209 | 1.2E-17 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 32 | 159 | 3.1E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 141 | 8.5E-58 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 136 | 674 | 4.4E-180 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 30 | 39 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 97 | 3.6E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 123 | 145 | 3.6E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 10 | 30 | 3.6E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 115 | 3.6E-54 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 31 | 53 | 3.6E-54 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 7 | 640 | 25.357302 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 674 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 215 | - | - |
| Coils | Coil | Coil | 188 | 224 | - | - |
| Coils | Coil | Coil | 498 | 518 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_010941080.1 | heat shock protein 83 [Elaeis guineensis] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IHS5 | Heat shock protein 83 OS=Cocos nucifera OX=13894 GN=COCNU_08G007290 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology