Basic Information
Locus ID:
COCNU_08G007150
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 46753852 | 46757058 | + | COCNU_08G007150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 100,428.94 Da | 37.13 | 99.01 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 628 | 915 | 7.5E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 328 | 386 | 4.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 72 | 3.7E-8 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 124 | 137 | 2.0 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 210 | 532 | 1.84E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 917 | 3.24E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 286 | 1.41E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 187 | 1.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 543 | 4.3E-97 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 608 | 707 | 8.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 932 | 2.9E-56 | - |
| SMART | SM00220 | serkin_6 | 628 | 921 | 3.7E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 229 | 251 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 349 | 373 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 253 | 277 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 278 | 301 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 921 | 38.378769 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 766 | 778 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 654 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 930 | 952 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010941424.1 | leucine-rich repeat receptor-like protein kinase TDR [Elaeis guineensis] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0II01 | Leucine-rich repeat receptor-like protein kinase TDR OS=Cocos nucifera OX=13894 GN=COCNU_08G007150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology