Basic Information
Locus ID:
COCNU_08G004720
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 37243951 | 37246945 | - | COCNU_08G004720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 35,403.93 Da | 29.43 | 91.84 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 11 | 301 | 1.6E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 304 | 1.64E-95 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 308 | 2.9E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 97 | 5.3E-31 | - |
| SMART | SM00220 | serkin_6 | 11 | 301 | 3.2E-92 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 11 | 301 | 45.417503 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 138 | 150 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 17 | 40 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 0 |
| RefSeq | XP_010932121.1 | cyclin-dependent kinase B2-1 [Elaeis guineensis] | 0 |
| Q0J4I1 | Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB2-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IHN8 | Cyclin-dependent kinase B2-1 OS=Cocos nucifera OX=13894 GN=COCNU_08G004720 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology