Basic Information
Locus ID:
COCNU_08G003230
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 33346683 | 33364064 | - | COCNU_08G003230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 77,647.87 Da | 39.07 | 95.32 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 241 | 652 | 2.6E-190 | IPR002554 |
| Pfam | PF01432 | Peptidase family M3 | 51 | 139 | 4.8E-8 | IPR001567 |
| SUPERFAMILY | SSF55486 | "Metalloproteases (""zincins""), catalytic domain" | 51 | 138 | 3.3E-8 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 253 | 634 | 1.55E-161 | IPR016024 |
| Gene3D | G3DSA:1.10.1370.10 | Neurolysin, domain 3 | 41 | 144 | 4.6E-18 | IPR024077 |
| Gene3D | G3DSA:1.25.10.10 | - | 248 | 651 | 4.2E-197 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 199 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26020.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol. | 0 |
| RefSeq | XP_008799952.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LU89 | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana OX=3702 GN=B'ETA PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IHM8 | Putative Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Cocos nucifera OX=13894 GN=COCNU_08G003230 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology