Basic Information
Locus ID:
COCNU_08G003110
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 33106652 | 33114294 | + | COCNU_08G003110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 46,466.86 Da | 39.96 | 121.42 | 0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 92 | 247 | 3.7E-20 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 284 | 403 | 1.7E-17 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 270 | 423 | 2.7E-13 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 121 | 259 | 2.5E-16 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 73 | 398 | 1.8E-98 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 57 | 400 | 6.8E-113 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_019708874.1 | vacuolar cation/proton exchanger 3 isoform X2 [Elaeis guineensis] | 0 |
| Q6K1C4 | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IHN0 | Vacuolar cation/proton exchanger OS=Cocos nucifera OX=13894 GN=COCNU_08G003110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology