Basic Information
Locus ID:
COCNU_08G002230
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 30057982 | 30061526 | - | COCNU_08G002230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 90,148.62 Da | 37.42 | 92.98 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 479 | 752 | 3.60291E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 474 | 742 | 1.2E-46 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 297 | 337 | 3.5E-6 | IPR025875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 749 | 6.75E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 343 | 1.05E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 229 | 3.2E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 551 | 760 | 3.0E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 358 | 2.7E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 443 | 550 | 6.8E-34 | - |
| SMART | SM00369 | LRR_typ_2 | 162 | 185 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 15 | 38 | 0.058 | IPR003591 |
| SMART | SM00220 | serkin_6 | 473 | 753 | 1.8E-40 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 17 | 38 | 7.519437 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 752 | 39.509491 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 598 | 610 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 479 | 501 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 785 | 826 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010932521.2 | LOW QUALITY PROTEIN: receptor protein kinase TMK1-like [Elaeis guineensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IHL4 | Receptor protein kinase TMK1 OS=Cocos nucifera OX=13894 GN=COCNU_08G002230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology