halophFGD

Basic Information

Locus ID: COCNU_07G014620

Species & Taxonomic ID: Cocos nucifera & 13894

Genome Assembly: GCA_008124465.1

Description: Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	59445873	59472636	-	COCNU_07G014620

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.04	106,669.43 Da	46.91	73.47	-0.48

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd16106	Ubl_Dsk2p_like	22	93	7.59422E-35	-
CDD	cd08154	catalase_clade_1	484	951	0.0	-
Pfam	PF00240	Ubiquitin family	24	91	1.6E-20	IPR000626
Pfam	PF00199	Catalase	486	866	2.4E-172	IPR011614
Pfam	PF06628	Catalase-related immune-responsive	891	952	3.3E-16	IPR010582
SUPERFAMILY	SSF56634	Heme-dependent catalase-like	481	957	3.53E-206	IPR020835
SUPERFAMILY	SSF54236	Ubiquitin-like	17	105	1.62E-22	IPR029071
Gene3D	G3DSA:2.40.180.10	Catalase core domain	476	958	9.2E-204	-
Gene3D	G3DSA:3.10.20.90	-	19	105	4.0E-21	-
Gene3D	G3DSA:1.10.260.100	-	187	244	1.3E-10	-
SMART	SM00727	CBM	358	397	0.051	IPR006636
SMART	SM00727	CBM	402	438	96.0	IPR006636
SMART	SM00727	CBM	192	231	7.1E-11	IPR006636
SMART	SM01060	Catalase_2	486	869	3.9E-247	IPR011614
SMART	SM00727	CBM	140	188	1.1	IPR006636
SMART	SM00213	ubq_7	22	93	6.1E-18	IPR000626
ProSiteProfiles	PS50053	Ubiquitin domain profile.	22	91	19.978138	IPR000626
ProSiteProfiles	PS51402	catalase family profile.	482	960	74.083282	IPR018028
ProSitePatterns	PS00437	Catalase proximal heme-ligand signature.	812	820	-	IPR002226
ProSitePatterns	PS00438	Catalase proximal active site signature.	522	538	-	IPR024708
PRINTS	PR00067	Catalase signature	562	580	1.1E-79	IPR018028
PRINTS	PR00067	Catalase signature	767	794	1.1E-79	IPR018028
PRINTS	PR00067	Catalase signature	499	522	1.1E-79	IPR018028
PRINTS	PR00067	Catalase signature	799	825	1.1E-79	IPR018028
PRINTS	PR00067	Catalase signature	583	600	1.1E-79	IPR018028
PRINTS	PR00067	Catalase signature	602	620	1.1E-79	IPR018028

Gene Ontology

Biological Process:

GO:0006979 (response to oxidative stress)

Molecular Function:

GO:0004096 (catalase activity) GO:0005515 (protein binding) GO:0020037 (heme binding)

KEGG Pathway

KO Term:

K03781 (catalase [EC:1.11.1.6])

Pathway:

ko00380 (Tryptophan metabolism) map00380 (Tryptophan metabolism) ko00630 (Glyoxylate and dicarboxylate metabolism) map00630 (Glyoxylate and dicarboxylate metabolism) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01200 (Carbon metabolism) map01200 (Carbon metabolism) ko04011 (MAPK signaling pathway - yeast) map04011 (MAPK signaling pathway - yeast) ko04016 (MAPK signaling pathway - plant) map04016 (MAPK signaling pathway - plant) ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04146 (Peroxisome) map04146 (Peroxisome) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04212 (Longevity regulating pathway - worm) map04212 (Longevity regulating pathway - worm) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species)

Module:

M00532 (Photorespiration)

Reaction:

R00009 (2 Hydrogen peroxide <=> Oxygen + 2 H2O) R00602 (Methanol + Hydrogen peroxide <=> Formaldehyde + 2 H2O) R02670 (2 3-Hydroxyanthranilate + 4 Oxygen <=> Cinnavalininate + 2 Superoxide + 2 Hydrogen peroxide + 2 H+)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G35090.3	-
RefSeq	XP_010918244.1	catalase isozyme 1 [Elaeis guineensis]
Swiss-Prot	P17598	Catalase isozyme 1 OS=Gossypium hirsutum OX=3635 GN=CAT1 PE=2 SV=2
TrEMBL	A0A8K0IGA8	Catalase OS=Cocos nucifera OX=13894 GN=COCNU_07G014620 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg17241, jg30393, jg827
Aizoaceae	Mesembryanthemum crystallinum	1	gene_21537
Amaranthaceae	Atriplex hortensis	1	Ah009545
Amaranthaceae	Beta vulgaris	1	BVRB_9g212540
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg10935, Sbi_jg47408
Amaranthaceae	Salicornia europaea	1	Seu_jg21655
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00018765, GOSA_00018766
Amaranthaceae	Suaeda glauca	2	Sgl55594, Sgl60808
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000017866, gene:ENSEOMG00000038091 ... gene:ENSEOMG00000052182
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.5AG0028090, CQ.Regalona.r1.7BG0001860
Anacardiaceae	Pistacia vera	2	pistato.v30108830, pistato.v30212120
Apiaceae	Apium graveolens	2	Ag10G00460, Ag11G04484
Arecaceae	Cocos nucifera	5	COCNU_07G014620, COCNU_08G009250, COCNU_09G005280 ... COCNU_10G009130, scaffold021765G000010
Arecaceae	Phoenix dactylifera	4	gene-LOC103701100, gene-LOC103706874, gene-LOC103716592 ... gene-LOC103723159
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.1056.V1.1, AsparagusV1_07.2371.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G18358, Ftri17G18081, Ftri18G21293, Ftri6G03217
Brassicaceae	Arabidopsis thaliana	2	AT2G17190.1, AT2G17200.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10022621m.g.v1.0, Thhalv10024813m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp3g30510.v2.2, Sp7g33070.v2.2
Brassicaceae	Brassica nigra	4	BniB02g013480.2N, BniB03g064870.2N, BniB04g026440.2N ... BniB05g003090.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G0069, Ceq07G1827
Casuarinaceae	Casuarina glauca	2	Cgl06G0078, Cgl07G1993
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g10280, gene.Cymno03g05490
Dunaliellaceae	Dunaliella salina	1	Dusal.0814s00004.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g07340, gene.Thate06g18290
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-3087, nbisL1-mrna-5640, nbisL1-mrna-6938
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG02.2866
Plantaginaceae	Plantago ovata	1	Pov_00007070
Plumbaginaceae	Limonium bicolor	1	Lb4G21724
Poaceae	Echinochloa crus-galli	6	AH01.3048, AH01.5195, BH01.3394, BH01.5014, CH01.3635 ... CH01.5614
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0115290, gene-QOZ80_2BG0169080 ... gene-QOZ80_3AG0232500, gene-QOZ80_3BG0295440
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.1HG0054790.1, HORVU.MOREX.r3.4HG0409910.2 ... HORVU.MOREX.r3.6HG0563670.1
Poaceae	Lolium multiflorum	2	gene-QYE76_012354, gene-QYE76_071095
Poaceae	Oryza coarctata	4	Oco05G001950, Oco06G001900, Oco19G009180, Oco20G009050
Poaceae	Oryza sativa	2	LOC_Os03g03920.1, LOC_Os10g39620.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G298700, gene-BS78_01G493000
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0100404, Pt_Chr0100474, Pt_Chr0705396
Poaceae	Sporobolus alterniflorus	9	Chr01G038200, Chr04G005290, Chr06G028560, Chr07G006270 ... Chr09G003990, Chr12G001330, Chr13G021000, Chr15G019800, Chr18G002380
Poaceae	Thinopyrum elongatum	2	Tel1E01G349500, Tel4E01G536300
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG030700, gene_TRIDC1BG036210 ... gene_TRIDC4BG054760, gene_TRIDC5AG070860
Poaceae	Triticum aestivum	6	TraesCS1A02G203000.1, TraesCS1B02G217000.1 ... TraesCS1D02G206500.1, TraesCS4B02G325900.2, TraesCS4D02G322800.1, TraesCS5A02G498100.1
Poaceae	Zea mays	4	Zm00001eb002530_P003, Zm00001eb022400_P002 ... Zm00001eb393840_P003, Zm00001eb402540_P001
Poaceae	Zoysia japonica	3	nbis-gene-3021, nbis-gene-36206, nbis-gene-47035
Poaceae	Zoysia macrostachya	2	Zma_g15615, Zma_g2145
Portulacaceae	Portulaca oleracea	2	evm.TU.LG02.2022, evm.TU.LG23.274
Posidoniaceae	Posidonia oceanica	1	gene.Posoc02g11530
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_3_RagTag.39, evm.TU.Scaffold_6_RagTag.2182
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-117, nbisL1-mrna-16953, nbisL1-mrna-171
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-11429, nbisL1-mrna-20751
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-11651, nbisL1-mrna-5846
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000011l.1338, evm.TU.utg000019l.1194
Rhizophoraceae	Kandelia obovata	2	Maker00006779, Maker00007058
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-15718, nbisL1-mrna-6602
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-2483, nbisL1-mrna-2933
Salicaceae	Populus euphratica	3	populus_peu08431, populus_peu14014, populus_peu36920
Solanaceae	Lycium barbarum	3	gene-LOC132616489, gene-LOC132621272, gene-LOC132623848
Solanaceae	Solanum chilense	1	SOLCI004199200
Solanaceae	Solanum pennellii	3	gene-LOC107010680, gene-LOC107011114, gene-LOC107014744
Tamaricaceae	Reaumuria soongarica	2	STRG.11670_chr02_-, gene_12287
Tamaricaceae	Tamarix chinensis	1	TC10G0250
Zosteraceae	Zostera marina	2	Zosma04g21410.v3.1, Zosma06g28650.v3.1