Basic Information
Locus ID:
COCNU_07G013550
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
PPCK4
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 50635441 | 50635913 | + | COCNU_07G013550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 13,300.07 Da | 20.74 | 95.16 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 73 | 120 | 1.5E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 120 | 8.77E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 69 | 127 | 4.0E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 128 | 12.428746 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 74 | 86 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04217 (Necroptosis)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04530.1 | phosphoenolpyruvate carboxylase kinase 2. Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light. | 0 |
| RefSeq | XP_010934324.1 | LOW QUALITY PROTEIN: phosphoenolpyruvate carboxylase kinase 2-like [Elaeis guineensis] | 0 |
| Q93VK0 | Phosphoenolpyruvate carboxylase kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PPCK2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0IHF8 | Putative Calcium-dependent protein kinase 20 OS=Cocos nucifera OX=13894 GN=COCNU_07G013550 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg5811 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah019980, Ah024570, Ah030830 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6AG0000470 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G013550 |
| Poaceae | Zea mays | 2 | Zm00001eb158010_P001, Zm00001eb266030_P001 |