Basic Information
Locus ID:
COCNU_07G009320
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 27779859 | 27782516 | - | COCNU_07G009320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 94,763.34 Da | 32.03 | 103.30 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 76 | 131 | 9.6E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 553 | 572 | 0.92 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 709 | 884 | 1.5E-33 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 409 | 467 | 7.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 479 | 539 | 8.8E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 68 | 2.9E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 884 | 8.2E-50 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 348 | 4.0E-59 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 303 | 597 | 6.28E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 885 | 1.2E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 381 | 2.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 177 | 3.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 382 | 623 | 1.6E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 249 | 1.8E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 56.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 707 | 885 | 8.1E-8 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 504 | 526 | 7.080498 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 885 | 30.633337 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 713 | 738 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 505 | 518 | 3.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 550 | 563 | 3.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_010918931.1 | MDIS1-interacting receptor like kinase 1 [Elaeis guineensis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IF71 | MDIS1-interacting receptor like kinase 1 OS=Cocos nucifera OX=13894 GN=COCNU_07G009320 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology