Basic Information
Locus ID:
COCNU_07G007590
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 21296936 | 21307963 | + | COCNU_07G007590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 32,373.46 Da | 48.53 | 70.99 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 7 | 155 | 2.8E-71 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 80 | 153 | 2.9E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 3 | 78 | 5.8E-33 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 245 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_019705610.1 | ubiquitin fusion degradation protein 1 homolog [Elaeis guineensis] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8K0IFS2 | Ubiquitin fusion degradation protein 1 OS=Cocos nucifera OX=13894 GN=COCNU_07G007590 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology