Basic Information
Locus ID:
COCNU_07G007420
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
C4-dicarboxylate transporter malic acid transport protein domain containing protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 20878633 | 20880580 | + | COCNU_07G007420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 63,294.53 Da | 43.96 | 88.16 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 205 | 509 | 1.7846E-103 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 206 | 510 | 7.1E-45 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 202 | 520 | 4.3E-67 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_019705552.1 | guard cell S-type anion channel SLAC1 [Elaeis guineensis] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IEZ9 | Guard cell S-type anion channel SLAC1 OS=Cocos nucifera OX=13894 GN=COCNU_07G007420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology