Basic Information
Locus ID:
COCNU_07G002080
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 5415979 | 5419443 | - | COCNU_07G002080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 126,305.80 Da | 48.46 | 75.24 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 498 | 739 | 1.01875E-130 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 881 | 1144 | 3.2E-125 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 522 | 656 | 2.1E-29 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 516 | 675 | 9.6E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 498 | 739 | 2.1E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 399 | 1150 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 519 | 748 | 31.938622 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 801 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 775 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 298 | - | - |
| Coils | Coil | Coil | 839 | 859 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_010920185.1 | translocase of chloroplast 120, chloroplastic [Elaeis guineensis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N4H7 | Translocase of chloroplast, chloroplastic OS=Cocos nucifera OX=13894 GN=COCNU_07G002080 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology