Basic Information
Locus ID:
COCNU_06G020590
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
amino acid
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 79930384 | 79932821 | + | COCNU_06G020590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 63,642.16 Da | 28.04 | 104.58 | 0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 75 | 480 | 3.4E-42 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 514 | 564 | 1.2E-15 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 70 | 507 | 7.1E-94 | - |
| PIRSF | PIRSF006060 | AA_transporter | 65 | 450 | 1.3E-64 | - |
| PIRSF | PIRSF006060 | AA_transporter | 457 | 584 | 2.7 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_010905430.1 | cationic amino acid transporter 1-like [Elaeis guineensis] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IE58 | Cationic amino acid transporter 1-like OS=Cocos nucifera OX=13894 GN=COCNU_06G020590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology