Basic Information
Locus ID:
COCNU_06G016870
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 51804607 | 51811941 | + | COCNU_06G016870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 58,957.46 Da | 55.68 | 55.28 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 404 | 461 | 2.3E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 229 | 284 | 3.3E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 226 | 287 | 2.22E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 395 | 463 | 3.66E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 388 | 464 | 1.0E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 220 | 288 | 2.3E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 403 | 462 | 5.8E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 228 | 286 | 1.6E-35 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 229 | 287 | 22.572664 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 398 | 463 | 37.126007 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 386 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_019703691.1 | probable WRKY transcription factor 4 [Elaeis guineensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0N3C3 | Putative WRKY transcription factor 4 OS=Cocos nucifera OX=13894 GN=COCNU_06G016870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology