Basic Information
Locus ID:
COCNU_06G016170
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 48909792 | 48913151 | - | COCNU_06G016170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 120,974.20 Da | 44.38 | 99.18 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 846 | 1114 | 3.7994E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 226 | 286 | 9.9E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 299 | 321 | 1.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 156 | 173 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 602 | 661 | 1.5E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 78 | 7.5E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 843 | 1040 | 3.6E-41 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 177 | 217 | 2.3E-6 | IPR025875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 819 | 1111 | 5.13E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 118 | 466 | 8.63E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 478 | 735 | 5.1E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 916 | 1115 | 8.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 499 | 742 | 1.1E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 346 | 469 | 1.5E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 345 | 8.5E-75 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 802 | 915 | 3.2E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 248 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 648 | 671 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 600 | 624 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 672 | 695 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 840 | 1092 | 2.2E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 840 | 1114 | 37.375256 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 251 | 273 | 7.21911 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 846 | 868 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 960 | 972 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 203 | 216 | 5.0E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 648 | 661 | 5.0E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 769 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010906158.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Elaeis guineensis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0ICH2 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Cocos nucifera OX=13894 GN=COCNU_06G016170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology