Basic Information
Locus ID:
COCNU_06G015730
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Serine threonine-protein kinase HT1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 47525885 | 47533536 | - | COCNU_06G015730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 42,313.85 Da | 26.24 | 80.61 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 88 | 348 | 6.53599E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 87 | 334 | 7.2E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 351 | 2.05E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 356 | 1.7E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 62 | 177 | 2.3E-15 | - |
| SMART | SM00220 | serkin_6 | 82 | 351 | 2.1E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 376 | 35.961857 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 240 | 252 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010938227.1 | serine/threonine-protein kinase STY13 [Elaeis guineensis] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0ICJ1 | Serine/threonine-protein kinase STY13 OS=Cocos nucifera OX=13894 GN=COCNU_06G015730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology