Basic Information
Locus ID:
COCNU_06G015060
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 44740953 | 44744300 | + | COCNU_06G015060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 27,505.17 Da | 51.40 | 59.84 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 18 | 242 | 1.7E-88 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 128 | 231 | 3.53E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 125 | 245 | 2.5E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 131 | 235 | 23.127308 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 42 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_010936171.1 | auxin-responsive protein IAA30 [Elaeis guineensis] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N431 | Auxin-responsive protein OS=Cocos nucifera OX=13894 GN=COCNU_06G015060 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology