Basic Information
Locus ID:
COCNU_06G014620
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 42850347 | 42855423 | + | COCNU_06G014620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 57,388.67 Da | 37.83 | 83.71 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15898 | EFh_PI-PLC | 359 | 475 | 6.9065E-15 | - |
| CDD | cd05117 | STKc_CAMK | 52 | 310 | 2.19122E-142 | - |
| Pfam | PF13405 | EF-hand domain | 431 | 456 | 3.1E-5 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 53 | 311 | 1.5E-76 | IPR000719 |
| Pfam | PF00036 | EF hand | 358 | 385 | 2.0E-7 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 386 | 417 | 0.0063 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 333 | 1.48E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 350 | 478 | 1.67E-33 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 319 | 3.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 138 | 1.2E-30 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 320 | 493 | 7.8E-43 | - |
| SMART | SM00054 | efh_1 | 394 | 422 | 1.7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 53 | 311 | 1.3E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 358 | 386 | 1.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 430 | 458 | 0.04 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 311 | 49.516361 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 354 | 389 | 15.657116 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 426 | 461 | 12.78389 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 390 | 425 | 8.515894 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 403 | 415 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 82 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 367 | 379 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 439 | 451 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_008810968.1 | calcium-dependent protein kinase 20-like [Phoenix dactylifera] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0N352 | Calcium-dependent protein kinase 20 OS=Cocos nucifera OX=13894 GN=COCNU_06G014620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology