Basic Information
Locus ID:
COCNU_06G014140
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 41234645 | 41246365 | - | COCNU_06G014140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 63,452.65 Da | 36.75 | 75.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 382 | 453 | 3.4E-15 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 44 | 365 | 2.4E-75 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 44 | 365 | 1.41E-77 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 43 | 371 | 2.5E-111 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 379 | 476 | 8.3E-8 | - |
| SMART | SM00768 | X8_cls | 381 | 466 | 9.8E-41 | IPR012946 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 552 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010934539.1 | glucan endo-1,3-beta-glucosidase 4 isoform X1 [Elaeis guineensis] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0ICW8 | Glucan endo-1,3-beta-glucosidase 2 OS=Cocos nucifera OX=13894 GN=COCNU_06G014140 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology