Basic Information
Locus ID:
COCNU_06G013050
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37912373 | 37923031 | - | COCNU_06G013050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 66,224.39 Da | 34.94 | 68.91 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 459 | 586 | 2.07785E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 260 | 389 | 3.1164E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 22 | 152 | 4.44148E-48 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 152 | 7.5E-35 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 456 | 586 | 5.4E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 260 | 389 | 3.8E-28 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 249 | 389 | 2.49E-39 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 444 | 585 | 5.36E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 1.83E-45 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 236 | 389 | 1.9E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 439 | 586 | 9.0E-52 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 4 | 152 | 3.4E-58 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 456 | 587 | 1.8E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 260 | 391 | 9.3E-39 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 153 | 2.2E-42 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 249 | 391 | 50.139141 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 153 | 55.438393 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 445 | 587 | 49.773354 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_038990479.1 | jacalin-related lectin 3 isoform X1 [Phoenix dactylifera] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IDD4 | Jacalin-related lectin 3 OS=Cocos nucifera OX=13894 GN=COCNU_06G013050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology