Basic Information
Locus ID:
COCNU_06G011950
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 34481654 | 34485364 | + | COCNU_06G011950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 58,302.62 Da | 38.14 | 92.83 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 376 | 447 | 3.8E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 38 | 359 | 1.6E-62 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 38 | 359 | 1.38E-76 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 369 | 459 | 5.4E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 37 | 363 | 9.0E-101 | - |
| SMART | SM00768 | X8_cls | 375 | 460 | 4.5E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 272 | 285 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010929487.1 | glucan endo-1,3-beta-glucosidase 1 isoform X1 [Elaeis guineensis] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A8K0IBU6 | Glucan endo-1,3-beta-glucosidase 1 OS=Cocos nucifera OX=13894 GN=COCNU_06G011950 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology