Basic Information
Locus ID:
COCNU_06G011020
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 31717041 | 31721769 | + | COCNU_06G011020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 24,166.37 Da | 39.70 | 81.67 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 83 | 195 | 5.0E-22 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 196 | 4.91E-35 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 156 | 7.5E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 204 | 7.9E-8 | - |
| SMART | SM00219 | tyrkin_6 | 81 | 216 | 3.6E-5 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 81 | 216 | 17.347378 | IPR000719 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54590.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_029122737.1 | LOW QUALITY PROTEIN: calcium/calmodulin-regulated receptor-like kinase 1 [Elaeis guineensis] | 0 |
| Q9FIU5 | Calcium/calmodulin-regulated receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRLK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0N2T9 | Putative Calcium/calmodulin-regulated receptor-like kinase 1 OS=Cocos nucifera OX=13894 GN=COCNU_06G011020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16728, jg29538 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000009421, gene:ENSEOMG00000042156 |
| Amaranthaceae | Chenopodium quinoa | 16 | CQ.Regalona.r1.2AG0008970, CQ.Regalona.r1.2AG0009740 ... |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G011020 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2329 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2495 |
| Poaceae | Oryza coarctata | 1 | Oco11G007370 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG20.18 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12421, nbisL1-mrna-17488 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018876 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24574 |
| Salicaceae | Populus euphratica | 1 | populus_peu25094 |