Basic Information
Locus ID:
COCNU_06G009710
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 28134480 | 28155976 | + | COCNU_06G009710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 112,215.34 Da | 43.36 | 87.98 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 491 | 707 | 5.86846E-48 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 553 | 589 | 5.4E-8 | IPR001680 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 239 | 435 | 3.3E-26 | IPR001245 |
| Pfam | PF00400 | WD domain, G-beta repeat | 488 | 521 | 0.0015 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 593 | 631 | 1.5E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 486 | 706 | 3.66E-46 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 484 | 9.13E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 279 | 491 | 4.5E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 174 | 277 | 3.6E-20 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 492 | 764 | 3.1E-47 | IPR015943 |
| SMART | SM00320 | WD40_4 | 550 | 589 | 1.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 482 | 521 | 2.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 634 | 672 | 380.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 592 | 631 | 4.8E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 489 | 523 | 10.838322 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 528 | 556 | 9.305395 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 599 | 640 | 13.783434 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 201 | 489 | 26.096323 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 489 | 523 | 13.048234 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 599 | 634 | 10.970139 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 557 | 598 | 15.989036 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 557 | 594 | 12.341042 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 508 | 522 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 618 | 632 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 576 | 590 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 508 | 522 | 1.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 576 | 590 | 1.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 618 | 632 | 1.4E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_019701568.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X5 [Elaeis guineensis] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IC58 | Protein kinase domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_06G009710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology