Basic Information
Locus ID:
COCNU_06G008120
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 23560734 | 23567103 | + | COCNU_06G008120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 144,648.84 Da | 46.58 | 71.25 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1045 | 1302 | 1.50661E-114 | - |
| CDD | cd06410 | PB1_UP2 | 164 | 260 | 5.90018E-46 | - |
| Pfam | PF00564 | PB1 domain | 177 | 261 | 8.2E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1041 | 1302 | 2.1E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1025 | 1301 | 8.75E-79 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 176 | 267 | 3.64E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 179 | 261 | 3.2E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1030 | 1126 | 2.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1127 | 1315 | 5.9E-55 | - |
| SMART | SM00666 | PB1_new | 175 | 262 | 2.1E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1039 | 1308 | 1.4E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1039 | 1305 | 41.007694 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1164 | 1176 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1045 | 1070 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1121 | 1134 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1158 | 1176 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1229 | 1251 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1273 | 1295 | 2.0E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 638 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| Coils | Coil | Coil | 458 | 478 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010923831.1 | uncharacterized protein LOC105046804 [Elaeis guineensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IAY9 | Serine/threonine-protein kinase EDR1 OS=Cocos nucifera OX=13894 GN=COCNU_06G008120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology