Basic Information
Locus ID:
COCNU_06G006030
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 16054054 | 16059878 | - | COCNU_06G006030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 161,710.83 Da | 31.05 | 104.34 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 528 | 587 | 4.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1003 | 1062 | 4.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 145 | 202 | 3.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 1168 | 1454 | 1.2E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 61 | 5.3E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1158 | 1455 | 4.59E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 221 | 582 | 1.8E-59 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 743 | 1069 | 1.1E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 306 | 1.97E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 746 | 4.43E-7 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 311 | 3.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 204 | 2.1E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 685 | 746 | 6.3E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1250 | 1474 | 1.0E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 747 | 833 | 6.2E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1160 | 1249 | 2.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 838 | 1097 | 1.0E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 627 | 4.4E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 287 | 311 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 526 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 574 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 84.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1166 | 1479 | 8.8E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 978 | 1001 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 762 | 786 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1026 | 1049 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 62.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1166 | 1479 | 36.442413 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1294 | 1306 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1172 | 1202 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010919346.1 | receptor-like protein kinase HSL1 [Elaeis guineensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IAJ9 | Putative LRR receptor-like serine/threonine-protein kinase HSL2 OS=Cocos nucifera OX=13894 GN=COCNU_06G006030 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology