Basic Information
Locus ID:
COCNU_06G005590
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 14932186 | 14940097 | - | COCNU_06G005590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 87,487.48 Da | 44.73 | 95.15 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 16 | 54 | 1.4E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 503 | 752 | 2.8E-24 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 18 | 210 | 1.77E-17 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 502 | 752 | 2.6E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 571 | 2.8E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 758 | 6.0E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 14 | 231 | 4.2E-30 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 756 | 19.099993 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 416 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_029120784.1 | protein MALE DISCOVERER 2 isoform X1 [Elaeis guineensis] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IB68 | Protein MALE DISCOVERER 2 OS=Cocos nucifera OX=13894 GN=COCNU_06G005590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology